The "pure direct" (and equivalent) modes of most current mainstream avrs also work with digital inputs, which makes me wonder if they are still true analog bypass modes (unless they treat analog inputs differently). That and the makers now only claiming the turning off of unnecessary subsystems (video, dsp, front panel display, etc) makes me think that these are no longer the same "pure direct" modes that were present in older AVRs.
Marantz, Arcam, Nad, Rotel, Cambridge, Cary, etc. have analog bypass modes (called bypass, source direct, etc.) that only work with analogue inputs. I know that these truly omit any digital processing.